Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004446.1 Hibiscus syriacus cultivar Beakdansim tig00009760_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30437

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2045--2095
24
2.1
24
85
0
66
41
17
11
29
1.85
2059--2137
24
3.3
24
80
0
86
36
18
16
27
1.93
14406--14442
19
1.9
19
88
0
56
40
0
5
54
1.24
15620--15694
37
2.0
37
100
0
150
24
13
36
26
1.92
21222--21269
3
16.0
3
91
0
51
60
0
0
39
0.97
21581--22160
36
17.6
35
63
22
143
40
14
16
28
1.87
21581--22168
65
9.0
66
90
0
880
40
14
16
28
1.87
21813--22051
29
7.5
29
67
18
127
40
14
15
29
1.87
22114--22154
20
2.1
19
86
4
55
43
17
17
21
1.87
29719--29760
3
14.0
3
100
0
84
66
0
0
33
0.92
30068--30195
36
3.7
36
73
16
135
40
16
15
27
1.89
30072--30417
66
5.4
66
86
5
444
39
14
17
28
1.88

Tables:   1

The End!