Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004455.1 Hibiscus syriacus cultivar Beakdansim tig00009798_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53339

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4457--4511
18
3.1
18
86
5
85
16
12
25
45
1.83
15793--15817
10
2.5
10
100
0
50
64
36
0
0
0.94
24016--25090
257
4.2
257
88
2
1421
33
15
16
33
1.91
24650--24737
42
2.1
41
82
2
104
26
20
19
34
1.96
24907--25003
42
2.3
41
80
5
115
24
21
20
32
1.97
31775--31841
26
2.5
29
75
24
83
64
1
0
34
1.03
31766--31837
24
2.9
24
75
22
69
66
1
0
31
1.00
31799--31858
19
3.0
20
77
18
63
63
6
0
30
1.20
33655--33700
24
1.9
24
95
0
83
50
6
0
43
1.28
34329--34358
5
5.8
5
92
7
51
80
3
0
16
0.85

Tables:   1

The End!