Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004456.1 Hibiscus syriacus cultivar Beakdansim tig00009809_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41421

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6521--6592
24
3.0
24
81
6
92
51
16
13
18
1.77
6533--6592
12
5.0
12
76
8
68
50
16
16
16
1.79
6528--6615
24
3.6
25
76
8
85
48
15
14
20
1.80
6521--6629
48
2.3
48
82
9
125
48
15
15
20
1.81
9054--9111
10
6.5
8
82
11
53
20
22
39
17
1.92
9053--9090
18
2.0
20
90
10
62
23
21
36
18
1.95
9093--9130
13
2.9
13
84
0
58
21
21
42
15
1.89
9106--9151
18
2.6
18
85
0
65
17
15
47
19
1.82
9080--9146
31
2.2
31
83
0
80
19
17
44
17
1.87
11199--11291
24
3.9
24
78
0
96
48
16
12
22
1.80
13759--13788
13
2.3
13
100
0
60
20
23
40
16
1.91
15333--15522
29
6.6
29
85
4
267
38
21
4
35
1.73
18119--18210
44
2.1
44
88
6
134
29
17
18
34
1.94
18425--18483
21
2.8
21
82
10
75
54
16
6
22
1.66
26989--27040
3
17.0
3
84
4
50
44
0
0
55
0.99
27788--27868
28
2.7
30
83
13
103
44
9
30
14
1.78
27790--27861
28
2.6
28
95
0
126
43
11
29
16
1.82
29120--29183
29
2.3
26
76
7
65
31
4
1
62
1.25
32463--32494
15
2.1
15
94
0
55
25
18
9
46
1.79
39717--39761
4
12.2
4
86
13
62
82
0
17
0
0.68
39722--39772
11
4.7
11
88
9
70
82
0
17
0
0.67
39717--39761
15
3.1
15
93
6
83
82
0
17
0
0.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41117--41407
92
3.5
80
85
11
363
27
12
22
37
1.90

Tables:   1

The End!