Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004473.1 Hibiscus syriacus cultivar Beakdansim tig00009861_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75836

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
976--1015
21
1.9
21
85
10
55
30
5
30
35
1.79
6008--6047
12
3.3
12
89
0
53
17
7
27
47
1.74
10787--10830
12
3.2
13
84
15
54
70
2
2
25
1.10
10787--10840
14
4.0
14
77
20
53
68
1
5
24
1.21
11089--11134
23
2.0
23
82
0
56
76
6
4
13
1.14
12902--14297
85
16.4
84
86
1
1775
24
17
21
35
1.95
15437--15687
95
2.6
95
90
3
369
31
18
17
32
1.94
19564--19652
14
6.2
14
75
13
65
82
2
3
12
0.90
19568--19660
20
4.5
20
78
8
89
80
2
3
13
0.93
19572--19647
22
3.6
21
75
10
57
82
2
3
10
0.89
20090--20269
4
44.5
4
68
24
67
73
3
2
20
1.10
20088--20252
10
16.4
10
70
20
89
75
3
2
18
1.07
20076--20172
23
4.2
24
72
20
73
76
2
2
19
0.99
20156--20189
18
1.9
17
88
5
50
76
11
0
11
1.02
20200--20269
30
2.3
30
81
13
81
72
1
2
22
1.05
20197--20268
34
2.2
34
87
9
105
72
1
2
23
1.06
22191--22232
2
21.0
2
95
0
75
52
0
0
47
1.00
23206--23247
21
2.0
21
95
0
75
26
28
21
23
1.99
23353--23419
19
3.5
19
93
0
107
35
11
10
41
1.76
23484--23574
31
3.0
31
95
3
159
42
16
6
34
1.74
24722--25064
43
8.0
43
73
13
187
25
15
7
51
1.69
24857--25056
87
2.3
87
83
7
257
25
18
8
48
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24857--25056
44
4.7
43
77
10
203
25
18
8
48
1.75
24857--25084
44
5.3
43
76
10
171
26
17
8
47
1.76
26832--26929
21
4.7
21
71
9
65
25
15
19
39
1.91
26935--26994
23
2.8
21
87
5
75
15
23
28
33
1.94
38947--39067
31
3.9
31
78
4
118
47
7
5
38
1.56
40634--40871
119
2.0
119
100
0
476
32
21
16
29
1.95
58084--58128
18
2.5
17
79
10
54
13
13
0
73
1.10
60213--60440
54
4.3
53
89
3
323
33
11
16
38
1.85
60236--60485
54
4.6
53
84
4
212
32
13
16
38
1.87
67608--67906
82
3.6
83
77
9
247
33
15
17
34
1.91
67759--68159
85
4.8
85
82
5
405
29
19
18
32
1.95
68236--68278
16
2.6
17
82
10
54
44
30
2
23
1.66
73861--73920
18
3.2
19
81
11
70
43
13
13
30
1.82

Tables:   1

The End!