Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004497.1 Hibiscus syriacus cultivar Beakdansim tig00009919_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52531

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3584--3617
18
1.9
17
88
5
50
47
0
2
50
1.16
3655--3695
2
20.5
2
100
0
82
51
0
0
48
1.00
19190--19242
18
2.8
19
74
5
63
33
11
11
43
1.76
19368--19448
41
2.0
41
97
0
153
27
17
13
41
1.87
21008--21172
22
7.5
22
90
0
240
16
23
29
30
1.96
23255--23348
48
2.0
48
97
0
179
26
22
21
29
1.99
23319--23384
23
2.9
23
88
0
105
33
16
22
27
1.96
24091--24133
14
3.0
14
79
3
50
27
2
2
67
1.15
24918--24945
14
2.0
14
100
0
56
42
21
0
35
1.53
26685--26808
42
2.9
43
81
10
139
36
19
21
22
1.95
30626--30945
41
7.7
41
81
3
363
32
16
22
28
1.95
30626--30945
83
3.9
83
86
2
419
32
16
22
28
1.95
30626--30945
124
2.6
123
85
4
412
32
16
22
28
1.95
31863--32082
31
7.1
31
91
0
323
36
18
18
26
1.94
33537--33572
17
2.1
17
90
10
56
41
0
5
52
1.24
34131--34233
42
2.5
42
80
0
107
24
33
17
24
1.96
34239--34281
21
2.0
21
90
0
68
23
32
23
20
1.98
34803--34882
24
3.3
23
67
10
61
45
13
3
37
1.62
35007--35047
21
2.0
21
95
0
73
53
0
0
46
1.00
35153--35644
137
3.7
135
87
4
647
35
21
20
23
1.96
35140--35644
131
3.8
133
85
6
633
35
21
20
23
1.96

Tables:   1

The End!