Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000045.1 Hibiscus syriacus cultivar Beakdansim tig00000071_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77343

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3938--4000
31
2.0
31
93
6
110
47
9
20
22
1.78
3937--3987
15
3.3
15
71
13
50
47
5
23
23
1.73
8986--9028
12
3.6
12
75
12
52
48
0
0
51
1.00
14741--14882
31
4.5
32
76
4
110
37
7
8
46
1.63
14915--15011
32
3.1
30
70
10
79
46
5
4
44
1.44
23747--23805
27
2.2
28
81
9
77
33
5
32
28
1.79
23791--23856
30
2.2
30
91
0
105
36
16
34
12
1.86
35407--35459
16
3.3
16
75
0
61
43
33
16
5
1.72
35725--35778
29
1.9
30
82
14
71
42
1
0
55
1.10
38053--38078
13
2.0
13
100
0
52
76
0
7
15
0.99
41207--41254
2
24.0
2
100
0
96
50
0
0
50
1.00
42717--42763
21
2.2
21
81
11
51
51
2
4
42
1.33
48371--48910
276
2.0
265
83
7
676
27
12
23
36
1.91
59778--59832
27
2.0
27
100
0
110
30
10
18
40
1.85
60315--60374
25
2.4
25
81
10
70
36
0
3
60
1.14

Tables:   1

The End!