Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004501.1 Hibiscus syriacus cultivar Beakdansim tig00009929_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72186

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60--518
84
5.5
83
93
2
737
36
21
13
28
1.91
1449--1526
8
9.6
8
81
13
88
0
12
0
87
0.55
1449--1526
33
2.4
34
86
4
115
0
12
0
87
0.55
1450--1526
1
77.0
1
76
0
73
0
11
0
88
0.52
4970--5004
17
2.0
18
88
5
54
60
0
14
25
1.35
12021--12058
15
2.8
13
88
11
51
68
2
5
23
1.23
13475--13566
45
2.0
45
95
0
166
27
18
21
32
1.97
14287--14375
3
29.7
3
95
0
160
64
1
1
33
1.09
16000--16034
18
1.9
18
88
0
52
40
0
0
60
0.97
24009--24033
2
12.5
2
100
0
50
0
48
0
52
1.00
24033--24060
2
14.0
2
100
0
56
50
0
0
50
1.00
25121--25188
32
2.1
32
86
0
91
35
13
8
42
1.75
27144--27200
12
4.5
14
70
20
54
56
0
1
42
1.10
30163--30834
200
3.4
198
86
3
843
32
14
13
38
1.86
32668--32706
20
1.9
21
89
5
62
17
15
15
51
1.77
32548--33104
182
3.1
182
91
0
855
28
14
13
43
1.83
39830--39868
20
2.0
20
100
0
78
38
10
10
41
1.73
39870--39911
21
2.0
20
86
4
57
40
7
14
38
1.73
46638--46782
48
3.0
48
97
0
281
28
20
21
28
1.98
47727--47774
24
2.0
25
84
8
64
31
6
18
43
1.75
49454--49496
19
2.3
19
91
0
68
23
20
32
23
1.98
55310--55364
27
2.0
27
100
0
110
25
18
16
40
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58837--58902
17
4.0
17
69
21
50
39
12
7
40
1.71
64761--64824
31
2.1
31
88
5
94
34
7
7
50
1.60
65006--65062
24
2.3
24
84
3
69
54
0
1
43
1.10
68290--68424
65
2.1
63
82
8
157
26
24
15
33
1.95

Tables:   1

The End!