Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004506.1 Hibiscus syriacus cultivar Beakdansim tig00009940_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64418

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
103--149
19
2.5
19
86
10
62
25
25
19
29
1.98
1802--3258
488
3.0
489
94
1
2576
30
24
11
33
1.91
3683--3747
26
2.5
26
97
2
123
30
35
7
26
1.84
5517--5576
28
2.1
28
100
0
120
26
18
18
36
1.94
7582--7709
59
2.2
59
82
9
147
30
22
13
33
1.92
7669--7953
59
4.8
59
77
7
285
29
21
11
37
1.88
7636--7886
117
2.1
117
83
5
310
29
22
11
36
1.89
7612--7886
118
2.3
118
81
5
326
29
22
11
36
1.89
7636--7945
117
2.6
117
80
6
306
29
21
11
37
1.89
12884--12926
2
22.0
2
95
4
79
48
0
0
51
1.00
14685--14711
13
2.1
13
100
0
54
85
0
0
14
0.61
16170--16210
14
3.2
13
83
12
50
58
7
0
34
1.26
16218--16256
19
2.2
18
86
9
53
48
2
0
48
1.15
16235--16339
31
3.1
34
78
15
119
48
6
0
44
1.29
16281--16348
31
2.2
31
84
5
84
54
5
1
38
1.34
16777--16865
40
2.2
40
93
0
151
29
19
22
29
1.98
21752--21780
2
15.0
2
92
7
51
51
0
0
48
1.00
22905--22959
20
2.8
21
83
5
62
29
20
20
30
1.97
30248--30323
21
3.7
22
75
18
83
34
0
1
64
1.02
30224--30304
26
3.0
26
74
13
65
32
0
2
65
1.06
30237--30303
15
4.6
15
70
18
52
31
0
1
67
1.00
30241--30323
10
7.0
12
68
25
52
33
0
1
65
1.01
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30506--30553
24
2.0
24
100
0
96
37
16
12
33
1.86
33633--33716
29
2.9
29
82
7
107
39
17
21
21
1.93
37085--37111
11
2.5
11
100
0
54
92
7
0
0
0.38
37085--37149
20
3.2
20
82
4
69
80
10
9
0
0.92
37092--37149
11
5.6
11
76
15
52
77
12
10
0
0.99
37126--37156
9
3.4
9
100
0
62
70
19
9
0
1.14
37105--37156
20
2.8
18
85
5
59
73
13
13
0
1.11
41975--42017
20
2.2
19
87
4
59
39
13
2
44
1.57
42774--42813
6
6.7
6
83
11
55
82
2
15
0
0.77
46127--46182
19
2.8
20
89
2
78
39
14
7
39
1.73
64160--64197
20
1.9
20
94
0
67
39
5
13
42
1.66

Tables:   1

The End!