Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004508.1 Hibiscus syriacus cultivar Beakdansim tig00009943_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  92097

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
508--544
16
2.3
16
90
0
56
37
16
16
29
1.90
565--606
22
1.9
22
90
9
68
52
7
4
35
1.50
2389--2435
19
2.4
20
92
7
87
40
4
4
51
1.41
13417--13455
19
2.1
19
100
0
78
51
17
15
15
1.77
21823--21873
8
6.8
8
79
20
65
31
0
1
66
1.03
21808--21864
24
2.4
24
81
0
69
28
0
5
66
1.13
21819--21878
13
4.8
13
79
8
79
30
0
1
68
0.99
21823--21882
16
3.9
16
78
12
72
30
0
1
68
0.99
27666--27710
23
2.0
23
95
0
81
20
17
22
40
1.92
30470--30696
113
2.0
113
96
0
418
36
9
20
33
1.84
33182--33227
21
2.2
21
100
0
92
41
0
23
34
1.55
35025--35095
23
3.0
23
85
4
97
28
18
19
33
1.95
39763--39807
23
2.0
23
95
0
81
20
17
22
40
1.92
42572--42798
113
2.0
113
96
0
418
36
9
20
33
1.84
45286--45331
21
2.2
21
100
0
92
41
0
23
34
1.55
47128--47198
23
3.0
23
85
4
97
28
18
19
33
1.95
52335--52379
22
2.1
22
87
4
65
31
8
15
44
1.77
65086--65163
31
2.5
31
91
0
120
33
5
5
56
1.43
68705--68734
11
2.7
11
94
0
51
53
3
10
33
1.51
69259--69312
28
1.9
28
84
0
72
44
7
14
33
1.73
69765--69832
23
3.0
23
78
8
75
19
23
25
32
1.97
82030--82077
24
2.0
24
87
0
69
62
14
12
10
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
85895--85937
19
2.3
19
96
4
79
37
30
4
27
1.77
89208--89311
45
2.3
45
85
3
129
35
19
20
25
1.95
90306--90335
5
6.2
5
92
7
53
43
0
16
40
1.48
90305--90333
14
2.1
14
100
0
58
41
0
13
44
1.44
90907--90967
23
2.7
23
78
0
77
19
22
26
31
1.98

Tables:   1

The End!