Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004509.1 Hibiscus syriacus cultivar Beakdansim tig00009945_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57713

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5854--6221
59
6.2
59
89
0
529
31
12
22
34
1.91
12718--13040
59
5.5
59
86
1
461
30
14
20
34
1.92
12718--13043
116
2.8
118
86
4
453
31
14
20
34
1.92
12718--13040
175
1.8
177
87
1
488
30
14
20
34
1.92
14064--14088
12
2.1
12
100
0
50
52
32
8
8
1.60
17552--17590
15
2.6
15
84
8
53
41
0
10
48
1.37
17560--17609
20
2.3
20
86
10
64
40
2
12
46
1.52
23120--23208
45
2.0
45
86
4
126
30
23
10
35
1.88
28244--28289
9
5.1
9
83
0
65
45
0
21
32
1.52
40132--40190
20
3.0
20
80
9
59
40
16
22
20
1.91
40154--40192
13
3.0
13
88
0
60
41
20
20
17
1.91
40735--40776
20
2.1
20
86
0
57
54
19
4
21
1.62
57358--57412
18
2.8
20
78
10
69
40
7
14
38
1.74

Tables:   1

The End!