Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004510.1 Hibiscus syriacus cultivar Beakdansim tig00009948_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44435

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6924--6986
12
4.8
13
70
20
51
41
1
1
55
1.19
8846--8900
23
2.3
23
81
3
65
47
1
0
50
1.11
27177--27217
21
2.0
20
86
13
57
24
0
2
73
0.96
27177--27217
20
2.0
21
86
13
59
24
0
2
73
0.96
28686--28730
21
2.1
21
87
0
63
31
28
24
15
1.96
30314--30531
103
2.1
103
94
0
382
26
12
23
37
1.91
30547--30607
23
2.7
23
89
0
95
19
26
27
26
1.99
33812--33856
21
2.1
21
87
0
63
31
28
24
15
1.96
35439--35656
103
2.1
103
96
0
400
25
13
23
37
1.91
35673--35732
23
2.6
23
89
0
84
20
25
28
26
1.99
35663--35740
23
3.3
23
80
1
75
23
19
23
34
1.96
43391--43759
20
18.5
20
84
5
442
34
25
18
20
1.96

Tables:   1

The End!