Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004511.1 Hibiscus syriacus cultivar Beakdansim tig00009950_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60969

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3181--3248
26
2.6
26
92
0
109
29
19
33
17
1.95
6013--6176
90
1.8
90
90
2
267
34
12
7
46
1.69
12779--12956
90
2.0
90
93
0
302
36
11
7
44
1.69
14915--14949
17
2.1
16
89
5
52
82
5
11
0
0.82
25707--25884
90
2.0
90
92
0
293
36
11
6
45
1.66
42066--42118
20
2.7
20
94
2
90
35
13
5
45
1.67
54496--54563
28
2.4
28
95
0
118
42
14
16
26
1.86
54496--54572
28
2.8
28
89
0
82
42
12
15
28
1.84

Tables:   1

The End!