Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004515.1 Hibiscus syriacus cultivar Beakdansim tig00009954_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75026

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7308--7339
15
2.1
15
94
0
55
46
9
18
25
1.79
10067--10091
9
2.8
9
100
0
50
52
0
0
48
1.00
12657--12709
3
17.0
3
84
7
70
62
0
0
37
0.96
14512--14604
41
2.3
41
81
3
107
26
26
17
29
1.97
15702--16058
105
3.4
105
94
0
626
38
17
12
32
1.86
15905--15949
23
2.0
23
90
0
72
28
13
6
51
1.66
16720--16750
12
2.6
12
100
0
62
45
32
16
6
1.72
19824--19879
2
28.0
2
100
0
112
50
0
0
50
1.00
21862--21887
11
2.4
11
100
0
52
19
7
23
50
1.73
24689--24761
2
36.5
2
100
0
146
49
0
0
50
1.00
26877--26939
3
20.3
3
80
6
63
60
1
38
0
1.07
34336--34370
15
2.3
15
90
0
52
11
22
11
54
1.68
37840--37867
14
2.0
14
100
0
56
28
42
7
21
1.79
44756--44855
24
4.4
23
65
23
59
46
1
2
51
1.19
46454--46479
4
6.5
4
100
0
52
23
0
0
76
0.78
62797--62883
24
3.7
24
92
1
131
22
25
22
28
1.99
64459--64516
24
2.4
24
88
0
89
22
20
24
32
1.98
68678--68733
21
2.7
21
77
0
58
19
19
33
26
1.96
71467--71519
27
2.0
27
88
0
79
30
7
22
39
1.82
71792--71816
2
12.5
2
100
0
50
48
0
0
52
1.00

Tables:   1

The End!