Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004518.1 Hibiscus syriacus cultivar Beakdansim tig00009963_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74948

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
372--414
17
2.4
18
88
7
70
16
27
0
55
1.41
546--580
18
1.9
18
88
0
52
48
2
34
14
1.58
6485--6753
133
2.0
134
98
1
522
39
16
10
34
1.83
9668--9773
50
2.3
46
83
16
123
33
3
11
51
1.55
17635--17683
19
2.5
20
93
3
82
46
6
12
34
1.66
17635--17690
19
2.9
19
89
2
67
42
7
12
37
1.70
19802--19842
21
2.0
21
85
0
55
19
29
17
34
1.94
29011--29066
25
2.3
25
84
6
71
58
12
14
14
1.63
44225--44305
24
3.5
23
64
6
56
34
19
16
29
1.94
47389--47414
13
2.0
13
100
0
52
30
30
0
38
1.58
52948--52997
19
2.6
20
87
9
77
12
8
18
62
1.53
61766--61832
28
2.4
28
94
0
125
20
37
20
20
1.95
62687--62721
18
1.9
18
88
11
54
80
2
17
0
0.84
66275--66336
27
2.2
28
76
18
67
61
9
17
11
1.56
66329--66359
5
6.2
5
92
0
53
77
3
19
0
0.90

Tables:   1

The End!