Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004522.1 Hibiscus syriacus cultivar Beakdansim tig00009978_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57766

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21131--21169
19
2.1
19
100
0
78
48
5
0
46
1.24
22339--22473
27
5.3
27
79
15
135
23
21
11
42
1.86
22284--22552
47
5.6
46
82
11
299
23
21
10
44
1.83
22312--22391
20
3.7
20
66
26
54
21
23
12
42
1.87
22330--22515
101
1.9
99
90
2
300
23
21
10
44
1.84
22434--22553
46
2.6
47
87
2
179
22
23
10
44
1.83
23875--24086
76
2.9
75
86
6
254
58
11
1
28
1.42
24021--24058
19
2.0
19
89
0
58
57
7
0
34
1.28
25796--25924
5
24.8
5
75
15
102
72
1
3
22
1.07
32107--32319
76
2.8
76
88
4
301
57
13
0
28
1.43
32255--32292
19
2.0
19
89
0
58
50
18
0
31
1.47
32704--32759
22
2.7
21
81
8
69
25
26
17
30
1.97
32652--32830
95
1.9
95
87
2
261
26
24
18
30
1.98
32799--32850
20
2.6
20
93
0
86
32
21
15
30
1.94
38989--39110
20
5.4
20
68
24
82
22
26
9
41
1.84
39004--39091
27
3.5
27
73
20
100
22
26
10
40
1.86
38907--39170
47
5.5
47
88
3
327
24
21
10
44
1.83
39656--39716
22
2.9
20
74
11
59
26
27
11
34
1.91
51987--52027
21
2.0
21
95
0
73
26
24
21
26
2.00
52776--52819
23
1.9
23
85
0
61
27
27
27
18
1.98

Tables:   1

The End!