Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004531.1 Hibiscus syriacus cultivar Beakdansim tig00010007_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47421

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6161--6207
22
2.1
22
84
7
60
19
14
0
65
1.26
6168--6217
21
2.3
22
83
12
68
16
22
0
62
1.33
13420--13467
18
2.5
18
83
16
53
77
2
14
6
1.06
16690--16750
21
3.0
21
88
7
81
54
18
4
22
1.63
21930--21983
20
2.7
20
85
0
72
37
9
20
33
1.84
24719--24789
20
3.5
20
92
0
106
35
4
21
39
1.73
24719--24814
20
4.8
20
92
0
102
34
9
20
35
1.85
24842--24881
20
2.0
20
90
9
64
30
22
17
30
1.97
25224--25290
34
2.0
34
87
0
98
31
16
28
23
1.96
26465--26494
8
3.8
8
100
0
60
36
0
63
0
0.95
28660--28811
42
3.6
42
81
2
155
39
15
15
29
1.88
28753--28933
41
4.4
41
77
1
146
35
17
19
27
1.94
29153--29369
85
2.6
83
81
3
274
31
17
17
33
1.93

Tables:   1

The End!