Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004537.1 Hibiscus syriacus cultivar Beakdansim tig00010019_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48168

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2519--2567
21
2.3
21
86
10
73
61
0
22
16
1.34
2597--2639
22
2.0
22
86
9
61
39
0
34
25
1.56
11226--11358
36
3.7
36
94
0
230
43
13
16
26
1.85
15987--16039
23
2.3
23
90
0
79
33
24
22
18
1.97
15995--16055
23
2.7
23
87
5
88
29
26
22
21
1.99
16277--16336
31
2.0
30
83
9
77
36
26
1
35
1.67
21313--21382
23
3.0
23
76
2
77
31
24
22
21
1.98
21596--21655
31
2.0
30
83
9
77
36
26
1
35
1.67
26767--26805
12
3.2
12
77
0
51
23
12
17
46
1.83
28699--28783
28
3.0
28
92
0
134
27
29
14
29
1.95
28701--28788
14
6.3
14
72
0
77
27
28
15
28
1.96
31853--31902
26
1.9
26
91
0
82
26
22
20
32
1.98
40141--40194
26
2.0
27
89
3
83
53
5
7
33
1.52

Tables:   1

The End!