Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000454.1 Hibiscus syriacus cultivar Beakdansim tig00000841_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66083

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1838--1864
5
5.4
5
100
0
54
18
18
18
44
1.87
2387--2416
16
1.9
16
93
6
53
26
0
46
26
1.53
8873--8914
20
2.1
20
86
0
57
35
19
9
35
1.84
10086--10145
30
1.9
32
83
6
79
46
0
15
38
1.45
10746--10784
19
2.0
21
90
10
64
43
0
20
35
1.52
14024--14095
31
2.3
31
90
0
108
26
11
8
54
1.64
15409--15440
14
2.4
14
90
10
50
62
0
0
37
0.95
17254--17329
3
25.7
3
80
17
88
64
0
1
34
1.02
17241--17329
24
4.0
21
76
17
72
60
0
1
38
1.04
17252--17330
24
3.2
25
86
12
117
64
0
1
34
1.02
17254--17329
14
5.4
14
81
9
82
64
0
1
34
1.02
17471--17840
73
5.1
73
92
1
591
37
12
18
31
1.88
17882--18370
164
3.0
164
94
0
816
38
12
12
36
1.81
18888--18941
22
2.5
22
93
0
90
37
12
14
35
1.85
23587--23658
7
9.4
7
75
19
56
2
16
0
80
0.83
23584--23658
16
4.6
16
79
11
73
2
17
0
80
0.84
23584--23658
23
3.2
22
79
18
80
2
17
0
80
0.84
23585--23654
26
2.7
25
80
12
88
2
15
0
81
0.81
23586--23650
11
6.2
11
71
18
50
3
15
0
81
0.81
26652--26727
14
5.5
14
68
7
57
60
10
11
17
1.58
26656--26712
20
2.8
20
81
0
60
63
8
10
17
1.51
29140--29189
21
2.4
21
100
0
100
60
4
4
32
1.34
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30449--30490
14
3.2
13
83
10
50
50
4
0
45
1.23
31672--31748
3
26.0
3
80
17
90
63
0
1
35
1.03
31660--31747
21
4.2
21
76
18
78
59
0
1
39
1.05
31673--31749
24
3.1
25
87
10
113
64
0
1
33
1.01
31672--31748
14
5.4
14
81
9
84
63
0
1
35
1.03
33908--34079
93
1.8
94
89
1
274
16
8
20
54
1.68
38254--38299
21
2.2
21
84
0
56
19
15
0
65
1.28
39152--39181
5
5.8
5
96
4
51
83
0
0
16
0.65
39193--39234
6
6.8
6
86
13
59
80
2
2
14
0.90
44744--44790
18
2.6
19
83
10
62
63
0
8
27
1.23
54937--54983
19
2.5
20
82
10
62
59
8
17
14
1.59
59542--59604
33
1.9
33
84
9
85
58
4
15
20
1.55
60844--60907
24
2.7
23
78
4
74
9
18
37
34
1.83
61136--61726
140
4.3
138
85
3
722
28
21
16
34
1.95
61172--61726
277
2.0
277
87
2
799
28
21
16
34
1.95
62431--62465
9
4.0
9
96
3
63
8
34
0
57
1.29
65800--65828
14
2.0
15
93
6
51
0
17
0
82
0.66

Tables:   1

The End!