Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004546.1 Hibiscus syriacus cultivar Beakdansim tig00010089_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50731

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3379--3427
2
25.0
2
95
4
91
48
0
0
51
1.00
3706--3739
2
17.5
2
93
6
61
50
0
0
50
1.00
4394--4459
34
1.9
34
93
0
114
13
25
42
18
1.87
4595--4640
3
14.7
3
91
8
74
65
0
0
34
0.93
7221--7265
22
2.0
22
82
0
54
35
22
15
26
1.94
7288--7341
20
2.7
20
88
0
72
33
27
16
22
1.95
7719--7754
18
2.0
18
94
0
63
25
33
8
33
1.86
10038--10121
32
2.7
30
75
8
87
40
5
25
28
1.79
10644--10675
12
2.7
12
90
0
55
62
0
12
25
1.30
14620--14667
23
2.2
21
85
14
62
31
2
2
64
1.16
14775--14853
23
3.4
23
83
10
99
56
3
2
36
1.31
14848--14901
22
2.5
22
84
0
72
48
0
1
50
1.11
17211--17302
45
2.0
45
95
0
166
46
4
38
10
1.59
19912--19947
18
2.0
18
88
0
54
55
0
44
0
0.99
24366--24393
13
2.2
13
100
0
56
7
14
17
60
1.55
26623--26687
32
2.0
32
93
0
112
47
6
0
46
1.27
26617--26684
15
4.5
15
71
10
59
45
2
0
51
1.16
26640--26703
32
2.0
32
84
3
85
50
6
0
43
1.27
26693--26762
3
24.0
3
78
16
67
62
2
1
32
1.18
31036--31064
2
14.5
2
100
0
58
48
0
0
51
1.00
36545--36603
21
2.8
21
84
2
73
28
13
27
30
1.94
45073--45127
24
2.5
22
81
18
62
49
0
3
47
1.19
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45519--45562
21
2.1
21
91
0
70
43
11
31
13
1.80
45596--45695
33
3.0
33
98
0
191
26
0
50
24
1.50
47811--48971
200
5.8
201
83
3
1428
37
14
16
31
1.89
47811--48977
401
2.9
399
84
3
1463
37
14
16
31
1.89
47811--48971
601
1.9
601
89
3
1782
37
14
16
31
1.89
49628--49655
2
14.0
2
100
0
56
50
0
0
50
1.00
50469--50528
9
6.7
9
84
0
66
38
3
30
28
1.73
50469--50528
6
10.0
6
83
0
66
38
3
30
28
1.73

Tables:   1

The End!