Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004550.1 Hibiscus syriacus cultivar Beakdansim tig00010103_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58081

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1831--1859
2
14.5
2
100
0
58
48
0
0
51
1.00
3270--3311
13
3.3
13
80
3
50
73
0
0
26
0.83
7760--7812
21
2.5
21
96
0
97
30
18
18
32
1.96
17009--17055
3
15.0
3
82
8
58
31
2
0
65
1.04
17008--17055
13
3.8
13
81
13
64
31
2
0
66
1.03
17009--17061
19
2.7
19
88
2
70
32
3
0
64
1.12
24301--24415
36
3.2
37
82
8
155
32
17
13
36
1.89
24570--24747
68
2.7
65
81
6
189
26
18
13
41
1.88
24638--24789
63
2.3
66
80
9
179
24
18
15
42
1.88
24794--25235
134
3.3
134
82
4
493
26
32
16
24
1.96
24979--25186
43
4.7
42
66
20
113
27
32
15
24
1.95
25433--25481
3
16.3
3
83
8
64
32
0
0
67
0.91
28719--28795
29
2.7
29
84
9
88
29
3
7
58
1.44
35161--35194
16
2.1
16
94
0
59
32
26
8
32
1.87
38835--38867
17
1.9
17
93
0
57
45
0
0
54
0.99
39437--39461
12
2.1
12
100
0
50
16
36
0
48
1.46
41865--41920
9
6.1
9
78
12
60
33
0
1
64
1.04
41850--41934
37
2.4
36
83
14
106
35
1
1
62
1.11
41872--41925
28
2.0
27
85
10
74
33
0
1
64
1.04

Tables:   1

The End!