Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004554.1 Hibiscus syriacus cultivar Beakdansim tig00010116_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75315

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5753--5800
19
2.5
19
75
0
51
22
16
37
22
1.94
10929--10985
30
2.0
30
86
6
82
71
3
5
19
1.19
14495--14895
54
7.5
54
85
0
500
26
18
21
33
1.96
14495--14892
107
3.7
108
83
3
516
26
18
21
33
1.96
25627--25676
23
2.2
23
82
7
57
46
0
0
54
1.00
25660--25716
24
2.5
21
81
13
60
47
0
1
50
1.11
25782--25833
21
2.8
18
73
18
52
44
0
0
55
0.99
27193--27236
19
2.3
19
96
0
79
45
13
9
31
1.75
31203--31236
13
2.6
14
90
9
54
50
0
8
41
1.34
33551--33616
23
3.0
23
76
12
75
28
19
24
27
1.99
39439--39585
66
2.3
66
83
9
196
30
15
19
34
1.93
40793--40818
13
2.0
13
100
0
52
15
23
0
61
1.33
42017--42074
21
2.8
21
94
0
98
32
10
8
48
1.68
43737--43823
46
1.9
46
90
2
140
29
18
6
44
1.75
43930--44045
61
1.9
61
85
7
164
31
26
17
25
1.97
49537--49616
38
2.1
38
85
0
106
55
25
8
11
1.64
49561--49601
22
1.9
21
85
5
55
58
21
7
12
1.58
51655--51756
47
2.1
50
89
7
156
27
11
23
37
1.90
55363--55453
27
3.3
27
83
11
112
9
27
12
50
1.71
55356--55455
30
3.4
30
80
8
125
10
27
11
52
1.68
58957--59000
17
2.5
17
81
3
52
47
11
0
40
1.39
59103--59136
13
2.4
15
90
9
54
58
8
2
29
1.43
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
69242--69271
15
1.9
16
93
6
53
40
10
3
46
1.54
69247--69333
29
3.0
28
77
11
77
32
20
3
43
1.69
71910--71949
21
1.9
21
85
10
55
15
10
37
37
1.80
72040--72092
15
3.3
15
74
23
54
22
22
33
20
1.97
72031--72111
33
2.4
34
91
6
130
22
20
35
20
1.96
72045--72112
18
3.9
18
75
24
74
22
19
36
22
1.95
72135--72176
21
2.0
21
90
9
68
16
26
33
23
1.96
72249--72307
31
1.9
31
100
0
118
44
18
5
32
1.72
72420--72475
19
2.9
19
82
10
69
46
12
12
28
1.78

Tables:   1

The End!