Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004555.1 Hibiscus syriacus cultivar Beakdansim tig00010117_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67806

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
169--211
13
3.5
13
84
12
63
30
20
16
32
1.95
192--351
82
2.0
82
86
5
225
32
19
18
30
1.95
4762--5157
222
1.8
216
83
7
530
52
11
3
31
1.56
4702--5284
322
1.8
323
86
5
865
53
11
3
31
1.53
4702--5380
102
6.4
103
72
14
429
53
12
3
31
1.54
7431--7466
17
2.1
18
89
5
56
52
0
0
47
1.00
7949--7994
14
3.5
12
83
16
56
28
0
0
71
0.86
7952--7989
18
2.1
18
90
9
60
28
0
0
71
0.87
8047--8111
33
2.0
33
96
0
121
40
18
12
29
1.87
8047--8127
33
2.5
33
89
4
110
37
18
14
29
1.91
8606--8647
7
6.1
7
84
15
61
26
0
0
73
0.83
8599--8644
4
12.2
4
82
17
55
26
0
0
73
0.83
8599--8652
27
2.1
25
89
6
81
27
0
0
72
0.85
13597--13647
3
17.7
3
84
15
72
31
0
0
68
0.90
13701--13765
33
2.0
33
93
0
112
41
18
10
29
1.84
13701--13780
33
2.4
33
87
4
99
38
17
13
30
1.88
14238--14273
7
4.9
7
87
12
54
27
0
0
72
0.85
14238--14282
23
2.0
22
91
4
72
26
0
0
73
0.84
15796--15828
3
11.0
3
100
0
66
66
0
0
33
0.92
15908--15954
16
2.9
16
84
12
53
10
12
25
51
1.72
16775--16835
30
2.0
30
96
0
113
49
16
8
26
1.73
22446--22556
57
1.9
57
89
3
170
24
19
18
37
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28358--28467
39
2.8
39
88
0
166
31
26
23
18
1.97
29238--29282
18
2.5
18
88
0
63
22
15
35
26
1.94
34025--34275
137
1.8
136
81
2
315
26
13
15
44
1.84
36173--36201
14
2.1
14
100
0
58
31
6
20
41
1.79

Tables:   1

The End!