Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004560.1 Hibiscus syriacus cultivar Beakdansim tig00010136_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80755

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2276--2388
59
1.9
59
90
0
181
30
17
23
28
1.97
2832--2866
13
2.6
13
90
4
52
62
2
2
31
1.24
4974--5624
135
4.8
135
82
2
740
32
19
17
30
1.95
6831--6864
12
2.8
12
86
0
50
0
26
0
73
0.83
6843--6896
20
3.1
17
80
19
51
0
14
1
83
0.73
6848--6904
29
1.9
29
85
3
78
0
14
1
84
0.71
6843--6904
19
3.2
19
86
2
79
0
14
1
83
0.71
22471--22550
13
5.8
13
73
16
54
1
17
1
80
0.86
22474--22512
16
2.5
16
83
4
53
0
23
0
76
0.78
22471--22552
7
11.7
7
80
7
78
1
18
1
79
0.87
39533--40118
292
2.0
292
95
0
1048
27
20
16
35
1.93
51298--51322
12
2.1
12
100
0
50
64
0
8
28
1.22
55158--55230
2
36.5
2
100
0
146
49
0
0
50
1.00
69193--69232
21
1.9
21
89
0
62
10
25
40
25
1.86
76864--76919
28
2.0
27
96
3
103
25
17
28
28
1.98

Tables:   1

The End!