Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004562.1 Hibiscus syriacus cultivar Beakdansim tig00010139_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  81706

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2378--2455
26
3.2
26
63
26
71
17
20
14
47
1.82
2223--2499
43
6.3
44
85
6
330
21
19
14
44
1.87
8594--8645
22
2.4
22
84
15
72
25
9
36
28
1.87
8685--8786
40
2.5
41
85
6
145
33
20
24
21
1.97
8699--8811
40
2.8
40
85
8
113
32
22
23
21
1.98
10184--10252
25
2.6
26
79
9
77
46
2
0
50
1.16
9902--11354
367
4.0
363
92
3
2345
37
8
8
45
1.65
11255--11302
23
2.1
23
92
0
78
47
0
2
50
1.12
39480--39536
18
3.1
19
75
12
55
26
7
0
66
1.17
42972--43020
19
2.2
24
66
33
63
12
57
8
22
1.61
42978--43019
19
2.2
19
100
0
84
11
59
4
23
1.51
53303--53329
6
4.5
6
100
0
54
14
0
0
85
0.61
56347--56403
18
3.1
19
75
12
55
26
7
0
66
1.17
57870--57915
12
3.8
12
100
0
92
26
17
8
47
1.76
61748--61780
15
2.1
17
88
11
52
12
9
3
75
1.14
61799--61825
6
4.5
6
100
0
54
14
0
0
85
0.61
65938--66040
31
3.4
31
69
25
78
29
0
9
61
1.28
66042--66071
14
2.1
14
93
0
51
10
0
6
83
0.81
66086--66126
10
4.0
10
87
6
55
43
2
2
51
1.28
68357--68432
31
2.5
31
86
4
100
52
14
3
28
1.59
68499--68565
27
2.5
27
85
0
89
43
16
4
35
1.68
72525--72810
45
6.4
45
84
2
351
21
19
15
43
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
75889--75963
22
3.5
20
89
3
69
25
22
18
33
1.97
75906--75963
22
2.6
22
97
0
107
27
20
18
32
1.97
76006--76074
21
3.5
20
72
11
61
34
20
15
28
1.94
79170--79221
22
2.4
22
84
15
72
25
9
36
28
1.87
79261--79362
40
2.5
41
85
6
145
33
20
24
21
1.97
79275--79387
40
2.8
40
85
8
113
32
22
23
21
1.98
80542--81706
349
3.3
352
87
8
1654
35
9
9
45
1.69

Tables:   1

The End!