Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004565.1 Hibiscus syriacus cultivar Beakdansim tig00010147_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53676

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7550--8176
133
4.8
129
74
11
425
32
17
18
31
1.94
8905--9221
45
7.1
45
76
6
234
41
21
12
24
1.88
8899--9221
90
3.6
90
74
9
295
41
21
13
24
1.88
9320--9413
45
2.1
45
85
0
125
43
14
15
25
1.86
9417--9746
45
7.5
45
75
9
261
42
17
16
24
1.89
9417--9709
132
2.2
132
83
6
351
42
17
16
23
1.88
9471--9746
87
3.1
86
75
10
238
42
16
16
24
1.88
9469--9746
132
2.1
132
82
5
330
42
16
16
24
1.88
12449--12519
3
23.7
3
100
0
142
66
0
0
33
0.92
15539--15567
5
5.8
5
100
0
58
79
0
0
20
0.74
17502--17530
2
14.5
2
100
0
58
48
0
0
51
1.00
22248--23054
132
6.1
132
76
6
672
31
19
18
30
1.96
23816--24490
45
15.2
44
75
5
427
41
20
15
22
1.89
23835--24490
87
7.4
88
75
7
476
41
20
15
22
1.90
23816--24450
132
4.8
132
83
3
729
42
20
15
21
1.89
23746--24427
45
15.2
45
72
10
195
42
20
15
22
1.89
30785--30821
16
2.3
16
90
0
56
13
45
18
21
1.84
43394--43461
3
22.0
3
82
5
82
39
0
0
60
0.97
43419--43466
15
3.1
16
88
8
55
37
0
0
62
0.95
44772--44806
17
2.1
17
89
5
54
34
2
0
62
1.10
44782--44861
16
4.8
16
71
18
56
25
6
2
66
1.28
50045--50083
8
4.8
8
81
6
51
79
0
20
0
0.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50043--50083
17
2.4
17
91
0
64
78
0
21
0
0.76
51193--51259
31
2.2
31
86
5
91
31
23
5
38
1.79
51430--51472
21
2.0
21
100
0
86
46
23
9
20
1.79
53420--53510
28
3.1
28
75
9
92
32
15
6
45
1.72

Tables:   1

The End!