Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004566.1 Hibiscus syriacus cultivar Beakdansim tig00010148_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49988

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3239--3294
29
1.9
29
85
0
76
25
8
25
41
1.84
3429--3473
24
2.0
23
86
8
65
17
20
26
35
1.95
3437--3554
24
5.0
24
76
17
97
23
20
22
33
1.97
6212--6253
20
2.3
18
81
18
52
30
14
28
26
1.95
6123--6342
95
2.4
92
88
3
307
35
16
23
25
1.95
6672--6947
57
4.8
58
88
6
420
34
11
19
35
1.87
9046--9111
31
2.1
31
97
0
123
19
15
37
27
1.92
10671--10774
47
2.2
47
82
5
120
22
20
21
36
1.95
11570--11649
40
2.0
40
100
0
160
35
12
17
35
1.88
13052--13101
20
2.5
20
90
3
75
40
14
4
42
1.64
18456--18607
81
1.9
79
82
8
191
42
7
5
44
1.54
24430--24478
20
2.8
17
77
19
55
30
16
28
24
1.96
24337--24559
95
2.3
95
92
0
365
32
15
26
25
1.95
24823--25236
59
7.1
59
89
1
618
34
11
19
34
1.88
24823--25236
117
3.5
118
90
1
602
34
11
19
34
1.88
30803--30857
24
2.3
24
81
3
67
21
27
21
29
1.99
42914--42959
20
2.4
19
85
3
56
28
10
4
56
1.53
47458--47507
21
2.5
20
87
9
66
30
12
26
32
1.92
48141--48195
24
2.3
24
78
3
58
20
27
21
30
1.98

Tables:   1

The End!