Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004568.1 Hibiscus syriacus cultivar Beakdansim tig00010153_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57898

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2135--2186
22
2.4
22
84
15
72
25
9
36
28
1.87
2226--2327
40
2.5
41
85
6
145
33
20
24
21
1.97
3435--4849
358
4.0
358
89
7
2120
37
8
8
45
1.66
4760--4803
21
2.1
21
91
0
70
47
0
2
50
1.13
4815--4880
23
2.9
22
71
8
60
54
4
0
40
1.21
5503--5547
21
2.1
21
84
8
56
48
2
2
46
1.26
14516--14555
18
2.2
18
86
0
53
10
2
10
77
1.08
28921--28954
11
3.0
11
86
4
50
76
0
2
20
0.92
28921--28973
25
2.2
24
83
6
63
73
1
7
16
1.15
34677--34726
18
2.8
18
71
14
50
28
6
2
64
1.28
38165--38205
19
2.2
19
100
0
82
12
58
4
24
1.53
39121--39154
12
2.8
12
100
0
68
23
17
8
50
1.74
43621--43647
6
4.5
6
100
0
54
14
0
0
85
0.61
50423--50465
22
2.0
22
86
9
61
11
16
4
67
1.38
52218--52299
25
3.2
25
67
17
60
24
1
7
67
1.24
52247--52294
21
2.3
21
78
7
53
16
2
8
72
1.18
52295--52335
10
4.0
10
87
6
55
43
2
2
51
1.28
54562--54633
31
2.3
31
85
4
92
51
15
4
29
1.62
54697--54762
27
2.5
27
82
2
80
42
16
4
36
1.69

Tables:   1

The End!