Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004569.1 Hibiscus syriacus cultivar Beakdansim tig00010155_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84338

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
283--614
128
2.6
128
84
4
422
39
18
9
32
1.83
1428--1621
107
1.8
108
83
6
261
48
15
11
23
1.78
2593--2633
3
13.7
3
94
0
73
65
2
0
31
1.05
2931--3184
133
1.9
132
82
2
312
30
16
24
28
1.97
31380--31440
20
2.8
22
69
23
56
44
3
1
50
1.28
31384--31422
19
2.0
20
85
5
53
46
2
0
51
1.14
31790--31860
20
3.5
20
72
11
72
49
2
5
42
1.41
31855--31889
3
11.7
3
93
0
61
28
0
2
68
1.04
35977--36040
3
21.3
3
93
0
110
64
0
0
35
0.94
36178--36225
2
24.0
2
100
0
96
50
0
0
50
1.00
39274--39314
17
2.4
17
87
0
55
85
2
4
7
0.81
43939--44095
64
2.5
64
81
6
165
35
17
22
24
1.96
45212--45250
2
19.5
2
83
0
51
46
2
0
51
1.14
45312--45373
2
31.0
2
100
0
124
50
0
0
50
1.00
50450--50483
2
17.0
2
93
0
59
52
0
0
47
1.00
50896--50954
23
2.6
23
71
15
59
20
22
27
30
1.98
52068--52621
282
2.0
277
91
3
909
31
20
19
28
1.97
54236--54287
18
2.9
18
97
0
95
30
40
13
15
1.86
71691--71783
48
1.9
48
97
0
177
41
5
15
37
1.69
79493--79523
2
15.5
2
100
0
62
51
0
0
48
1.00
84126--84155
14
2.1
14
93
0
51
16
23
3
56
1.55

Tables:   1

The End!