Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004581.1 Hibiscus syriacus cultivar Beakdansim tig00010220_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83981

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6801--6864
21
3.1
20
73
13
67
25
35
25
14
1.93
6802--6840
20
1.9
20
89
5
60
20
38
25
15
1.92
10758--10824
18
3.5
18
75
15
71
28
29
19
22
1.98
10774--10837
22
3.1
22
73
15
73
31
25
20
23
1.98
10758--10837
40
2.0
40
92
0
133
30
27
20
22
1.98
12160--12250
47
1.9
47
86
2
128
30
24
3
41
1.71
13086--13135
16
3.1
16
72
16
50
78
4
2
16
1.00
14088--14164
35
2.2
35
88
0
118
42
23
1
32
1.62
15482--15557
35
2.2
34
86
6
107
32
1
23
42
1.63
30379--30407
6
5.0
6
91
8
51
82
0
0
17
0.66
30379--30407
11
2.5
12
94
5
51
82
0
0
17
0.66
31970--32041
20
3.9
18
71
20
60
20
33
19
26
1.97
32175--32214
20
1.9
22
90
10
66
37
37
10
15
1.80
35170--35209
21
1.9
21
89
0
62
30
10
10
50
1.69
35170--35215
21
2.1
21
84
4
56
32
8
8
50
1.64
35436--35505
20
3.8
18
72
18
56
21
28
21
28
1.99
35526--35563
20
1.9
20
88
0
58
21
36
18
23
1.95
35889--35959
34
2.1
33
84
7
90
33
15
26
23
1.95
38436--38531
34
2.8
34
76
14
90
43
2
8
45
1.45
39802--39854
25
2.1
25
96
0
97
37
15
16
30
1.90
50103--50140
20
1.9
20
94
0
67
15
39
31
13
1.86
53967--54062
32
3.0
32
84
0
129
30
16
16
36
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60414--60470
30
1.9
30
100
0
114
19
3
31
45
1.67
66575--66615
21
2.0
21
85
0
55
26
21
21
29
1.99
68835--68887
14
3.8
13
80
9
52
77
0
7
15
0.98
68849--68891
9
4.7
9
82
5
59
81
0
2
16
0.79
68952--69004
2
26.5
2
100
0
106
50
0
0
49
1.00
69285--69317
2
16.5
2
100
0
66
51
0
0
48
1.00
69990--70061
35
2.1
35
97
0
135
27
22
11
38
1.88
70897--71275
95
3.8
96
78
16
384
22
19
22
35
1.96
70687--71275
298
2.0
295
86
5
833
23
19
22
35
1.96
71045--71239
97
2.0
98
89
1
302
21
20
23
34
1.96
70563--71296
203
3.6
204
81
8
838
23
18
22
34
1.96
71167--71460
146
2.0
146
97
0
561
24
16
22
36
1.94
79458--79541
17
4.8
16
75
18
62
71
1
10
16
1.20
79473--79533
14
4.5
14
79
6
63
75
0
8
16
1.03
79473--79547
27
2.8
27
76
8
89
73
0
10
16
1.10
79590--79621
2
16.0
2
100
0
64
50
0
0
50
1.00
79700--79776
41
1.9
39
86
5
109
48
6
28
16
1.71
79891--79942
2
26.5
2
96
3
97
51
0
0
48
1.00
80099--80161
2
33.5
2
84
12
89
53
0
0
46
1.00
80088--80149
29
2.2
29
85
5
83
53
0
1
45
1.10
80615--80686
35
2.1
35
92
5
119
29
20
9
40
1.85

Tables:   1

The End!