Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004589.1 Hibiscus syriacus cultivar Beakdansim tig00010249_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59856

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27627--27696
28
2.4
29
86
9
90
17
25
24
32
1.96
27698--27735
17
2.2
17
95
0
67
18
44
23
13
1.85
27682--27742
24
2.6
22
79
10
68
16
40
24
18
1.90
31854--31963
30
3.6
30
75
8
98
56
1
6
35
1.35
31844--31995
60
2.5
61
85
5
184
55
2
5
36
1.37
33747--33784
19
2.0
19
90
10
60
78
0
5
15
0.91
33748--33789
5
8.6
5
82
15
52
80
0
2
16
0.81
36027--36319
148
2.0
145
87
2
426
44
8
9
37
1.68
40755--41040
143
2.0
143
95
0
518
29
26
9
33
1.89
45625--45666
2
21.0
2
100
0
84
50
0
0
50
1.00
51972--52137
91
1.8
90
96
1
305
38
10
6
44
1.65
53139--53223
43
2.0
43
100
0
170
35
10
9
44
1.71

Tables:   1

The End!