Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000046.1 Hibiscus syriacus cultivar Beakdansim tig00000072_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55575

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4173--4224
3
17.3
3
100
0
104
32
0
0
67
0.91
6102--6128
14
1.9
14
100
0
54
40
0
0
59
0.98
6253--6293
22
1.9
21
90
5
64
24
0
4
70
1.06
16449--16478
6
5.0
6
100
0
60
0
50
0
50
1.00
19682--19753
2
36.0
2
100
0
144
50
0
0
50
1.00
24461--24507
13
3.8
13
81
16
64
14
19
48
17
1.81
24520--24563
10
4.6
10
86
8
65
34
29
22
13
1.93
24520--24564
19
2.4
19
96
0
81
33
28
22
15
1.95
31708--31754
13
3.8
13
81
16
64
14
19
48
17
1.81
31767--31810
10
4.6
10
86
8
65
34
29
22
13
1.93
31767--31811
19
2.4
19
96
0
81
33
28
22
15
1.95
34498--34555
30
1.9
30
85
0
80
22
12
27
37
1.89
35332--35372
16
2.6
16
88
3
57
31
21
7
39
1.81
35449--35506
17
3.4
17
79
11
64
37
1
1
58
1.18
40630--40660
15
2.0
16
93
6
55
29
19
19
32
1.96
41438--41465
11
2.5
11
100
0
56
53
7
17
21
1.67
51377--51448
30
2.4
30
85
0
90
33
18
22
26
1.96

Tables:   1

The End!