Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004606.1 Hibiscus syriacus cultivar Beakdansim tig00010295_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70495

Tables:   1   

This is table  1  of  1  ( 46 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1072--1101
2
15.0
2
92
0
51
46
0
0
53
1.00
1066--1101
12
3.0
12
91
0
54
41
0
0
58
0.98
2131--2170
22
1.9
22
90
10
66
40
0
0
60
0.97
2132--2168
17
2.1
19
85
10
51
40
0
0
59
0.97
2132--2179
18
2.6
17
83
9
51
41
0
0
58
0.98
8580--8611
16
1.9
17
93
6
57
81
0
0
18
0.70
9055--9081
4
6.8
4
100
0
54
48
0
0
51
1.00
12100--12155
24
2.3
24
68
0
58
51
1
5
41
1.35
13218--13242
6
4.2
6
100
0
50
0
0
32
68
0.90
13813--13865
21
2.6
21
85
11
67
45
0
0
54
0.99
13813--13853
19
2.2
20
91
8
68
43
0
0
56
0.99
18535--18582
3
15.7
3
81
12
53
58
0
2
39
1.10
18537--18582
17
2.7
17
86
6
58
58
0
2
39
1.10
18535--18592
20
2.9
19
87
5
71
55
0
1
43
1.10
18538--18582
14
3.4
14
74
20
51
57
0
2
40
1.11
18535--18591
23
2.5
23
82
5
62
56
0
1
42
1.10
18721--19072
135
2.6
135
88
1
483
27
21
16
34
1.95
18987--19155
92
1.9
90
89
2
266
25
23
13
37
1.92
18852--19299
227
2.0
227
93
0
761
25
21
17
35
1.95
35569--35631
25
2.5
25
89
0
90
47
14
6
31
1.69
35618--35648
2
16.0
2
93
6
55
51
0
0
48
1.00
36168--36227
27
2.2
27
81
0
66
26
11
18
43
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39325--39375
26
2.0
26
92
7
86
39
7
1
50
1.42
42751--42779
14
2.0
15
93
6
51
27
17
13
41
1.87
47059--47098
21
1.9
21
89
0
62
25
40
25
10
1.86
51556--51585
14
2.1
14
93
0
51
43
0
10
46
1.37
51769--51815
14
3.3
14
80
11
51
59
2
2
36
1.21
51808--51868
23
2.7
23
82
7
70
50
0
1
47
1.10
52006--52038
15
2.2
15
94
0
57
39
6
6
48
1.53
56127--56176
23
2.2
23
85
0
64
46
2
4
48
1.32
56158--56219
26
2.4
25
82
10
72
38
0
4
56
1.21
56149--56221
31
2.3
31
79
9
85
41
1
4
53
1.28
56198--56236
15
2.7
15
88
4
53
38
0
2
58
1.12
56387--56456
27
2.7
26
73
20
67
51
2
0
45
1.16
57783--57819
18
2.0
19
89
5
58
37
0
0
62
0.96
57783--57820
19
2.0
19
85
10
51
39
0
0
60
0.97
62382--62541
65
2.5
64
88
4
250
31
22
16
30
1.96
68790--69133
128
2.7
128
91
1
548
45
7
8
37
1.63
69293--69329
19
1.9
19
88
0
56
32
27
16
24
1.96
69394--69441
20
2.4
20
96
0
87
43
16
16
22
1.87
69415--69546
61
2.2
61
79
5
142
32
25
19
21
1.97
69456--69603
20
7.3
20
72
11
122
30
28
18
22
1.98
69476--69590
41
2.8
41
82
2
151
31
27
19
21
1.97
69498--69564
21
3.2
21
71
12
66
32
23
19
23
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
70400--70446
24
2.0
24
95
0
85
27
21
17
34
1.95
70405--70451
24
1.9
24
91
4
76
25
21
17
36
1.94

Tables:   1

The End!