Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004613.1 Hibiscus syriacus cultivar Beakdansim tig00010318_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50078

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6512--6545
18
1.9
18
88
5
52
50
0
20
29
1.49
9846--9875
3
10.3
3
92
7
53
63
0
0
36
0.95
10304--10396
44
2.1
44
95
0
168
20
34
5
39
1.75
13138--13180
18
2.4
18
78
21
54
18
4
0
76
0.95
13141--13181
21
2.0
21
85
9
57
17
4
0
78
0.93
25120--25170
19
2.6
20
90
3
77
43
23
17
15
1.88
25120--25437
20
15.6
20
79
7
165
38
19
23
17
1.93
25245--25435
40
4.7
40
86
3
238
36
18
26
18
1.94
25224--25400
83
2.1
83
91
0
282
36
18
26
19
1.94
25525--25605
6
13.5
6
100
0
162
33
50
16
0
1.45
26295--26362
6
11.5
6
98
1
129
0
16
51
32
1.45
26472--26642
20
8.4
20
86
3
189
19
25
18
36
1.94
26483--26640
63
2.6
63
82
3
187
20
26
18
34
1.95
26470--26663
103
1.9
103
89
0
298
19
25
18
36
1.95
26679--26730
20
2.6
20
93
0
86
11
17
17
53
1.72
26717--26767
19
2.6
20
90
3
77
15
17
23
43
1.88
28668--28716
21
2.3
21
92
0
80
42
10
18
28
1.83
29705--29775
8
8.5
8
73
14
63
77
1
16
4
1.00
29709--29780
18
3.8
18
75
12
65
76
1
18
4
1.02
29704--29780
33
2.4
33
82
6
95
76
1
18
3
1.01
29744--29780
14
2.6
15
87
8
51
78
0
21
0
0.75
42789--42842
23
2.4
22
84
9
72
22
33
20
24
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49640--49736
41
2.4
41
75
5
106
25
21
19
32
1.97
49489--50058
228
2.5
231
86
4
794
32
16
16
34
1.91

Tables:   1

The End!