Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004616.1 Hibiscus syriacus cultivar Beakdansim tig00010326_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46473

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4709--4738
13
2.3
13
94
0
51
66
0
0
33
0.92
4862--4934
5
14.0
5
70
18
51
73
1
5
19
1.09
4864--4904
14
2.7
15
88
7
57
70
0
7
21
1.11
4856--4960
11
9.1
11
72
15
63
72
0
6
20
1.13
4856--4934
16
4.6
16
71
16
52
73
1
6
18
1.11
4878--4945
26
2.5
27
83
7
75
73
1
5
19
1.11
5978--6044
25
2.7
25
100
0
134
44
7
14
32
1.74
9891--9967
28
2.8
28
80
5
86
44
3
2
49
1.34
12350--12442
45
2.1
45
100
0
186
41
12
10
34
1.78
12546--12621
2
39.0
2
94
5
138
51
0
0
48
1.00
12717--12755
14
2.7
14
88
11
53
48
0
5
46
1.24
12756--12897
38
3.6
39
78
16
141
40
2
9
47
1.50
12950--13153
5
40.8
5
96
0
309
20
14
19
45
1.85
15313--15353
20
2.0
21
85
4
57
17
7
29
46
1.74
16424--16462
17
2.4
17
95
4
71
46
15
10
28
1.78
23420--23478
31
1.9
31
92
0
100
25
18
23
32
1.97
23458--23514
22
2.7
19
76
23
53
21
14
29
35
1.92
29870--30238
192
1.9
191
99
0
729
31
22
21
24
1.98
34620--34738
53
2.3
52
94
1
202
33
14
24
27
1.94
40466--40498
12
2.7
13
86
13
52
45
3
9
42
1.51

Tables:   1

The End!