Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004619.1 Hibiscus syriacus cultivar Beakdansim tig00010336_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49181

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6137--6364
34
6.4
34
78
7
197
43
3
8
44
1.50
7627--7683
15
3.8
14
75
13
51
17
1
1
78
0.91
7627--7669
15
2.7
16
85
7
52
20
2
0
76
0.89
7632--7726
32
2.8
32
76
22
88
22
4
2
71
1.14
7628--7709
37
2.2
38
83
16
118
21
2
1
74
1.01
13674--13737
33
1.9
33
83
0
83
45
6
32
15
1.71
17243--17515
89
3.1
88
76
10
252
60
12
11
16
1.60
17243--17515
30
9.2
30
80
7
279
60
12
11
16
1.60
17243--17536
59
4.9
60
76
6
183
59
11
11
16
1.60
17813--17850
16
2.4
16
95
0
67
57
13
2
26
1.49
18723--18784
3
21.0
3
93
3
108
64
0
1
33
1.03
18719--18791
6
11.3
7
89
7
63
65
0
1
32
1.01
18964--19455
130
3.7
134
75
6
423
26
18
31
24
1.97
19529--19596
35
2.0
35
88
2
102
36
11
20
30
1.89
19559--19736
65
2.7
64
85
4
230
42
14
14
29
1.84
19690--19787
32
3.2
29
81
9
115
38
13
11
36
1.80
19812--19911
34
2.8
36
77
8
107
36
11
20
33
1.87
21528--21593
2
33.0
2
100
0
132
50
0
0
50
1.00
21984--22036
21
2.5
22
75
12
56
28
24
22
24
2.00
27968--28238
30
9.2
30
76
6
221
61
11
10
16
1.57
28044--28111
29
2.3
29
87
5
93
63
14
8
13
1.52
29157--29215
7
8.4
7
98
0
100
0
52
0
47
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37008--37045
20
1.9
20
84
10
51
39
21
15
23
1.92
45678--45771
3
31.3
3
100
0
188
67
0
0
32
0.91
47294--47346
24
2.1
26
82
6
65
30
3
3
62
1.30
47944--47987
17
2.4
18
88
11
72
18
13
22
45
1.84

Tables:   1

The End!