Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000462.1 Hibiscus syriacus cultivar Beakdansim tig00000857_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66109

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1789--1820
16
2.0
16
93
0
55
34
12
3
50
1.56
1922--1946
13
1.9
13
100
0
50
44
8
8
40
1.63
7227--7285
31
1.9
30
83
13
75
35
20
23
20
1.96
13473--13507
18
1.9
18
88
11
54
51
17
8
22
1.72
14606--14659
3
18.0
3
100
0
108
66
0
0
33
0.92
15055--15115
19
3.1
19
72
23
63
31
3
3
62
1.27
15799--15840
19
2.4
19
88
11
63
38
0
7
54
1.28
15803--15847
19
2.3
19
82
14
56
40
0
8
51
1.33
16722--16763
9
4.7
9
80
11
50
57
0
14
28
1.38
16806--16851
18
2.4
19
85
7
58
32
0
2
65
1.05
16957--17015
19
3.1
19
73
4
64
66
1
0
32
1.02
21163--21188
2
13.0
2
100
0
52
50
0
0
50
1.00
26757--26837
38
2.1
39
93
4
137
40
14
4
39
1.68
31115--31163
15
3.2
15
82
5
62
55
18
2
24
1.53
32533--33215
55
12.4
54
88
3
958
31
25
15
27
1.96
33718--33935
29
7.6
29
84
3
206
50
13
2
33
1.56
33718--33940
87
2.6
86
82
2
232
50
13
2
33
1.56
33718--33968
87
2.9
85
80
7
220
50
13
2
32
1.56
35406--35481
36
2.1
36
97
0
143
31
10
14
43
1.79
35903--35932
15
2.0
15
100
0
60
13
26
46
13
1.80
40402--40477
36
2.1
36
97
0
143
31
10
14
43
1.79
42868--42902
17
2.1
17
89
10
54
28
25
2
42
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43932--44083
7
21.7
7
68
19
52
9
17
0
73
1.13
43924--44039
45
2.6
44
84
6
146
7
17
0
74
1.10
43927--44109
30
6.4
29
69
14
105
8
16
0
74
1.09
43927--44068
58
2.4
59
79
12
148
9
16
0
72
1.15
44025--44082
20
3.0
19
80
9
55
13
15
0
70
1.17
44059--44100
16
2.6
16
82
17
59
4
14
0
80
0.86
53517--53619
45
2.2
47
84
6
138
39
19
13
27
1.89
55049--55097
15
3.2
15
82
5
62
55
18
2
24
1.53
56418--56481
5
13.8
5
95
3
75
0
60
0
39
0.97
56429--56484
4
12.8
4
94
1
58
0
57
0
42
0.99
63433--63467
14
2.5
13
86
13
52
82
5
11
0
0.82
63427--63467
19
2.2
18
86
4
55
82
4
12
0
0.81
64474--64547
32
2.3
32
76
0
76
32
12
24
31
1.92
64805--64935
64
2.0
64
92
2
219
35
22
10
31
1.88
65099--65252
43
3.6
43
81
0
191
30
31
16
22
1.95
65104--65265
86
1.9
86
84
2
218
31
29
17
21
1.96
65343--65889
83
6.5
83
81
2
608
33
21
18
26
1.97
65343--65889
167
3.3
165
83
2
646
33
21
18
26
1.97

Tables:   1

The End!