Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004620.1 Hibiscus syriacus cultivar Beakdansim tig00010339_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78376

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
509--706
48
4.2
48
82
8
192
34
14
22
28
1.94
553--706
48
3.3
46
86
6
204
35
16
22
24
1.95
734--863
45
2.8
45
85
8
172
33
17
22
26
1.96
575--1136
156
3.6
159
91
4
872
32
17
22
27
1.96
895--1019
46
2.7
47
91
2
200
33
18
20
28
1.96
937--1157
110
2.0
112
91
3
358
33
16
23
27
1.96
1046--1136
48
1.9
47
90
2
146
34
17
20
27
1.95
2251--2289
15
2.5
16
87
4
53
10
12
2
74
1.17
9292--9321
11
2.7
11
89
0
51
50
10
16
23
1.75
14456--14523
34
2.0
34
88
0
100
32
11
26
29
1.92
16244--16566
119
2.7
121
86
6
449
24
13
26
34
1.93
16647--16941
64
4.6
64
88
2
452
29
10
21
38
1.87
16647--16944
127
2.3
128
92
2
494
29
10
21
37
1.87
17896--18084
99
1.9
99
90
2
299
29
17
17
34
1.94
23186--23226
20
2.0
20
95
0
73
26
24
31
17
1.97
23420--23444
2
12.5
2
100
0
50
52
0
0
48
1.00
27347--27421
31
2.4
32
78
8
84
40
2
8
49
1.46
28631--28674
16
2.8
16
86
6
54
56
6
4
31
1.46
30654--30690
16
2.4
16
90
4
58
64
0
0
35
0.94
31108--31716
136
4.4
136
88
5
831
25
22
18
33
1.96
31767--31995
90
2.5
88
91
4
368
34
21
18
24
1.96
32047--32350
43
7.1
43
79
9
293
32
27
12
27
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32047--32341
86
3.4
86
82
8
352
32
27
12
27
1.92
32058--32350
128
2.3
129
89
0
453
32
28
11
26
1.92
32358--32658
36
8.3
36
81
7
265
34
15
21
28
1.94
32473--32558
15
5.3
15
71
15
73
32
17
24
25
1.97
32593--32725
40
3.3
40
90
1
187
41
13
16
28
1.86
37397--37483
28
2.8
30
74
17
97
63
10
13
12
1.53
48629--48678
26
2.0
25
84
4
64
34
4
2
60
1.27
49791--49943
60
2.6
60
86
1
191
41
16
9
31
1.81
51169--51216
17
2.8
17
96
0
87
45
8
12
33
1.72
59895--59952
28
2.2
26
81
6
62
41
13
17
27
1.87
60080--60149
24
3.0
23
72
6
68
20
21
25
32
1.97
61796--62181
185
2.1
189
86
4
541
49
8
6
36
1.57
63086--63143
1
58.0
1
78
0
53
0
10
1
87
0.60
63448--63552
52
2.0
52
100
0
210
34
13
21
30
1.92
63653--63678
3
8.7
3
100
0
52
69
30
0
0
0.89
63846--64411
259
2.2
258
91
0
909
34
16
15
34
1.89
64309--64388
42
1.9
41
82
2
97
28
21
22
27
1.99
66835--66861
11
2.5
11
100
0
54
0
14
0
85
0.61
74020--74044
2
12.5
2
100
0
50
52
0
0
48
1.00
74705--74729
10
2.5
10
100
0
50
0
8
0
92
0.40
76943--77063
4
30.8
4
75
6
68
26
41
1
30
1.65
76951--77075
24
5.3
24
77
2
92
26
39
1
32
1.66
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
76935--77083
12
12.9
12
71
11
78
25
38
1
34
1.65
76941--77084
8
18.2
8
68
16
59
25
38
1
34
1.65
76932--77084
20
7.6
20
71
8
112
25
37
1
35
1.65

Tables:   1

The End!