Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004629.1 Hibiscus syriacus cultivar Beakdansim tig00010361_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63448

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7964--8100
59
2.3
59
78
2
159
27
18
25
28
1.98
14311--14605
131
2.3
131
83
1
349
34
9
15
41
1.79
17899--17961
28
2.4
26
78
17
67
14
20
4
60
1.52
17909--17961
28
1.9
27
85
11
72
15
22
5
56
1.60
18853--18902
25
2.0
26
84
11
68
72
4
10
14
1.26
18864--18915
20
2.7
18
77
16
50
76
3
7
11
1.12
25690--25730
2
21.5
2
85
9
59
48
0
0
51
1.00
27818--28510
344
2.0
349
98
1
1342
31
20
20
27
1.97
31158--31237
41
1.9
42
85
7
110
27
17
20
35
1.95
38657--38703
16
3.0
16
96
3
87
51
6
17
25
1.69
39074--39117
2
22.5
2
95
4
81
50
0
0
50
1.00
43553--43600
17
2.9
17
77
20
57
52
0
0
47
1.00
43559--43600
16
2.6
16
78
10
50
52
0
0
47
1.00
43557--43630
32
2.4
30
84
10
89
47
1
2
48
1.24
62420--62596
25
6.8
26
81
11
170
75
0
20
4
0.98
62414--62610
38
5.3
36
79
10
184
75
0
19
5
0.98
62414--62601
6
29.3
6
83
11
180
76
0
19
4
0.96

Tables:   1

The End!