Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004630.1 Hibiscus syriacus cultivar Beakdansim tig00010362_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64526

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5240--5285
20
2.3
20
96
0
83
21
23
13
41
1.88
8598--8649
23
2.2
24
93
6
88
42
0
3
53
1.19
11685--11916
117
2.0
118
86
0
322
29
16
19
34
1.94
11797--12087
134
2.2
134
85
0
393
28
15
21
34
1.94
13299--13329
10
3.1
10
100
0
62
0
9
0
90
0.46
13294--13379
7
11.4
7
81
15
59
4
16
0
79
0.90
13297--13371
26
2.9
26
80
7
91
4
14
0
81
0.83
13299--13364
9
7.3
9
76
10
64
3
13
0
83
0.76
13299--13377
34
2.3
33
84
4
95
5
13
0
81
0.86
13297--13364
8
8.0
8
77
22
68
2
14
0
82
0.79
13354--13387
7
4.9
7
92
0
50
11
17
0
70
1.16
13309--13385
34
2.4
34
75
20
83
6
15
0
77
0.95
18241--18298
26
2.2
26
93
0
98
34
32
13
18
1.91
27721--27765
24
1.9
24
86
4
65
77
2
6
13
1.05
31275--31346
6
11.0
6
73
16
54
70
0
2
26
1.00
31305--31353
10
5.2
10
88
9
68
67
0
0
32
0.91
31305--31353
15
3.5
15
86
10
68
67
0
0
32
0.91
31292--31362
29
2.5
28
76
12
74
70
2
0
26
1.01
31491--31560
6
11.2
6
76
14
52
71
1
1
25
1.03
31491--31560
25
2.8
25
82
2
68
71
1
1
25
1.03
31489--31557
11
6.0
12
74
19
51
71
1
1
26
1.03
31491--31560
31
2.2
32
82
7
81
71
1
1
25
1.03
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31489--31560
12
6.4
11
74
16
58
70
1
1
26
1.03
31297--31685
195
2.0
193
85
5
525
43
12
14
29
1.82
43463--43597
36
3.8
36
91
0
216
27
14
16
42
1.86
45061--45285
49
4.6
49
86
0
306
37
15
22
24
1.93
52169--52383
49
4.4
50
82
8
278
39
13
20
26
1.90
53082--53153
27
2.7
25
82
10
72
44
8
4
43
1.53
53146--53188
15
2.8
16
86
10
63
44
6
2
46
1.43
53307--53514
69
3.1
69
89
2
314
45
7
6
40
1.57
53307--53476
18
9.8
18
75
11
158
46
7
6
40
1.57
53324--53532
36
6.3
33
74
14
162
44
7
6
40
1.59
53464--53569
29
3.6
29
84
10
112
43
6
4
45
1.51
53600--53741
61
2.3
61
85
2
196
47
6
9
36
1.62
53890--54078
103
1.8
103
90
2
308
34
26
5
32
1.81
58838--58883
20
2.3
20
96
0
83
45
0
13
41
1.43
59836--59901
23
2.8
24
79
4
71
40
0
1
57
1.08
60270--60314
16
2.9
16
96
3
83
44
20
15
20
1.87
61269--61307
14
2.7
15
84
8
53
41
0
5
53
1.23
61276--61307
14
2.3
14
94
0
55
40
0
3
56
1.15

Tables:   1

The End!