Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004633.1 Hibiscus syriacus cultivar Beakdansim tig00010371_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61991

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2834--2892
20
2.7
23
80
12
72
18
37
25
18
1.94
3268--3305
18
2.1
18
90
0
58
44
2
0
52
1.14
11629--11741
56
2.0
56
98
0
217
46
18
5
29
1.71
19507--19588
23
3.8
22
84
6
96
18
25
32
23
1.97
22664--22700
20
1.9
19
89
10
58
45
10
24
18
1.81
24248--24285
15
2.5
15
100
0
76
23
28
5
42
1.76
27915--27997
6
13.8
6
100
0
166
50
0
33
15
1.45
30699--30752
23
2.5
21
75
13
56
16
24
25
33
1.96
31732--31799
35
1.9
34
82
5
82
63
4
2
29
1.29
31979--32012
17
2.0
17
88
0
50
17
8
0
73
1.08
34819--34907
29
3.1
29
85
0
124
17
40
28
13
1.88
35114--35197
29
2.9
29
83
0
96
13
29
39
17
1.88
36503--36574
33
2.2
33
79
0
81
13
34
23
27
1.93
36561--36598
10
3.8
10
83
13
51
10
26
36
26
1.89
36556--36605
20
2.5
20
96
0
91
10
28
38
24
1.87
36594--36631
14
2.7
14
95
0
67
10
28
39
21
1.86
43209--43243
2
17.5
2
100
0
70
51
0
0
48
1.00
43485--43544
27
2.2
27
81
3
66
61
5
6
26
1.42
43505--43572
28
2.5
28
86
11
88
55
4
8
30
1.50
45584--45631
2
24.0
2
100
0
96
50
0
0
50
1.00
56621--56657
19
1.9
19
88
0
56
64
0
18
16
1.29

Tables:   1

The End!