Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004639.1 Hibiscus syriacus cultivar Beakdansim tig00010388_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49866

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4056--4109
25
2.1
26
93
3
92
50
11
7
31
1.66
5000--5075
39
1.9
39
100
0
152
51
9
5
34
1.56
8417--8456
2
20.0
2
100
0
80
50
0
0
50
1.00
10172--10222
5
10.2
5
100
0
102
41
39
0
19
1.52
14431--14510
20
4.0
20
68
22
60
48
3
1
46
1.28
14527--14574
23
2.1
23
92
3
80
52
0
2
45
1.12
15012--15315
151
2.0
151
98
0
581
35
10
14
40
1.79
18931--18973
20
2.1
21
91
4
70
41
13
6
37
1.72
25346--25386
21
1.9
22
90
5
66
24
21
21
31
1.98
25879--25925
24
1.9
25
82
4
60
29
19
8
42
1.80
27464--27496
17
2.1
16
88
11
50
24
6
0
69
1.10
27729--27840
31
3.6
31
81
1
134
47
5
7
40
1.54
36042--36258
45
4.8
45
100
0
434
29
11
12
46
1.77
39997--40041
13
3.5
13
84
3
65
15
17
44
22
1.86
41159--41194
6
5.8
6
87
6
54
44
0
0
55
0.99
41155--41194
13
3.2
13
89
7
64
42
0
0
57
0.98
41215--41252
20
1.9
19
89
5
58
50
5
0
44
1.24
46053--46179
45
2.8
45
100
0
254
29
11
11
46
1.76

Tables:   1

The End!