Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004651.1 Hibiscus syriacus cultivar Beakdansim tig00010425_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39986

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11473--11648
8
21.1
8
69
23
64
72
0
18
9
1.11
11479--11539
10
6.2
10
75
21
58
78
0
14
6
0.94
11479--11642
39
4.0
40
77
14
163
72
0
18
9
1.10
11589--11648
25
2.5
24
82
15
79
73
0
15
11
1.10
12672--12705
16
2.1
17
88
5
52
44
2
26
26
1.69
13019--13411
55
7.1
55
86
4
456
29
16
23
31
1.96
13015--13449
165
2.6
165
82
7
533
29
16
23
30
1.96
13015--13460
110
4.1
110
83
6
469
29
16
23
30
1.96
13034--13460
55
7.8
56
82
5
344
29
15
23
30
1.96
17259--17329
24
3.0
24
85
2
99
29
25
25
19
1.99
23486--23553
24
2.9
24
77
2
75
29
22
25
23
1.99
31589--31697
37
3.0
35
77
11
105
47
2
1
47
1.27
31621--31697
38
2.1
37
85
4
102
49
2
1
46
1.23
37704--37735
16
2.0
16
100
0
64
37
12
25
25
1.91
38068--38105
20
1.9
20
84
10
51
47
2
2
47
1.30

Tables:   1

The End!