Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004653.1 Hibiscus syriacus cultivar Beakdansim tig00010429_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85060

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1380--1412
17
1.9
17
93
0
57
45
0
6
48
1.27
2448--2492
21
2.1
21
91
0
72
35
0
0
64
0.94
6092--6118
2
13.5
2
100
0
54
48
0
0
51
1.00
10238--10314
26
2.8
27
82
13
95
40
3
6
49
1.47
10238--10333
30
3.4
28
78
14
90
38
5
6
50
1.50
24658--24693
16
2.2
17
90
5
56
38
13
0
47
1.44
26171--26196
13
2.0
13
100
0
52
30
7
30
30
1.85
28794--28845
22
2.4
22
93
0
86
40
32
13
13
1.83
30634--30659
4
6.5
4
100
0
52
76
0
0
23
0.78
31498--31531
2
17.5
2
87
6
52
47
2
0
50
1.16
31542--31584
21
2.0
21
81
0
50
30
0
9
60
1.28
34594--34680
23
4.0
22
75
8
70
31
24
19
25
1.98
34857--34907
21
2.4
21
90
0
75
27
21
13
37
1.91
35426--35483
20
2.9
21
89
5
75
25
29
13
31
1.94
40332--40357
2
13.0
2
100
0
52
50
0
0
50
1.00
51390--51424
17
2.1
17
88
0
52
22
42
20
14
1.88
53005--53114
55
2.0
55
89
0
166
23
20
15
40
1.90
54247--54347
49
2.1
49
86
0
139
20
25
18
34
1.96
57765--57807
2
21.5
2
100
0
86
51
0
0
48
1.00
67503--67568
24
2.8
24
80
0
78
13
10
15
60
1.59
67734--67758
10
2.5
10
100
0
50
12
0
16
72
1.13
72600--72649
18
2.8
18
79
11
66
62
4
10
24
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
84630--84681
26
1.9
28
88
7
81
30
5
11
51
1.61

Tables:   1

The End!