Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004670.1 Hibiscus syriacus cultivar Beakdansim tig00010473_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61602

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10979--11020
19
2.2
19
83
8
50
40
14
7
38
1.73
11723--11860
60
2.3
60
75
2
134
36
9
16
37
1.81
15072--15155
2
42.0
2
100
0
168
50
0
0
50
1.00
17786--18456
105
6.4
105
95
0
1155
21
18
27
33
1.96
28687--28730
20
2.2
20
88
8
63
75
2
4
18
1.09
29784--29814
4
7.8
4
92
0
53
77
3
0
19
0.90
33195--33307
59
1.9
59
88
0
172
45
8
6
39
1.61
33402--33436
8
4.4
8
96
0
61
54
0
8
37
1.31
35963--36018
17
3.3
17
77
7
51
35
1
0
62
1.06
44703--44751
24
2.0
25
92
4
82
63
10
8
18
1.50
44708--44760
24
2.2
24
82
0
70
64
11
7
16
1.48
45910--45991
25
3.1
25
77
13
92
40
1
2
56
1.20
45915--46002
28
3.2
28
73
21
80
39
1
2
56
1.19
52407--52451
22
2.0
22
100
0
90
42
8
8
40
1.67
57458--57590
71
1.9
71
92
1
223
28
14
7
49
1.70

Tables:   1

The End!