Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004671.1 Hibiscus syriacus cultivar Beakdansim tig00010474_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  103534

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9959--9995
4
9.2
4
93
0
65
51
21
0
27
1.48
13539--13582
19
2.2
21
80
12
56
59
9
9
22
1.56
19961--20006
22
2.1
22
91
0
74
30
15
17
36
1.91
20184--20359
91
2.0
88
94
3
307
31
30
15
22
1.95
24673--25199
197
2.7
197
78
7
534
41
12
15
29
1.84
28288--28329
2
21.0
2
100
0
84
50
0
0
50
1.00
29094--29123
15
2.0
15
93
0
51
30
6
13
50
1.67
31130--31694
199
2.8
199
87
0
761
38
15
13
32
1.86
31932--32312
197
1.9
194
84
3
496
39
12
17
31
1.86
34386--34496
57
1.9
57
94
0
195
36
27
8
27
1.85
41821--41870
25
2.0
25
100
0
100
44
28
8
20
1.79
45050--45080
2
15.5
2
100
0
62
48
0
0
51
1.00
45689--45814
54
2.3
54
82
6
157
28
18
23
30
1.97
45718--46195
54
8.8
54
86
0
542
37
16
13
32
1.87
48474--48515
21
2.0
21
95
0
75
50
0
19
30
1.48
48536--48607
30
2.4
30
97
0
135
45
8
11
34
1.70
49504--49576
23
3.2
23
94
0
128
23
28
13
34
1.93
49853--49917
34
1.9
34
84
6
87
32
13
29
24
1.94
52313--52392
32
2.5
32
76
10
74
45
12
23
18
1.84
57019--57174
64
2.5
63
88
6
235
30
21
16
31
1.96
65595--65750
64
2.5
63
84
6
190
32
19
15
32
1.93
66462--66768
81
3.8
81
86
2
395
29
22
11
36
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68639--68684
20
2.3
20
85
3
58
36
0
26
36
1.57
73480--73512
2
17.0
2
93
6
59
48
0
0
51
1.00
75352--75443
34
2.7
34
89
0
139
38
22
15
23
1.92
80405--80514
57
1.9
56
94
1
193
38
27
7
27
1.83
87697--87746
25
2.0
25
100
0
100
44
28
8
20
1.79
91336--91369
2
17.0
2
100
0
68
50
0
0
50
1.00
91976--92531
54
10.3
54
86
1
574
36
16
14
33
1.89
94939--94991
19
2.8
19
100
0
106
45
0
20
33
1.52

Tables:   1

The End!