Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004674.1 Hibiscus syriacus cultivar Beakdansim tig00010479_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55516

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
103--161
14
4.3
13
79
10
64
59
1
0
38
1.08
1610--1656
3
16.0
3
77
4
51
63
0
2
34
1.06
1612--1645
12
2.8
12
90
0
59
58
0
2
38
1.13
7899--8007
40
2.7
40
95
0
191
22
14
27
34
1.94
11091--11142
2
26.0
2
100
0
104
50
0
0
50
1.00
11782--11968
94
2.0
94
92
0
311
36
18
10
34
1.85
13035--13124
39
2.3
39
80
3
101
37
18
23
20
1.94
16023--16141
47
2.6
47
78
6
125
35
17
17
29
1.93
18851--18882
17
1.9
17
93
6
57
12
12
12
62
1.55
18957--18988
16
2.0
16
100
0
64
31
18
25
25
1.98
21624--21730
31
3.3
31
67
16
74
23
20
17
38
1.93
24772--24892
47
2.6
46
80
3
116
38
23
15
21
1.92
26852--26905
25
2.2
24
80
12
56
27
20
7
44
1.78
33574--33635
13
4.8
13
93
0
97
32
14
20
32
1.93
34295--34452
19
8.4
19
75
12
112
37
23
11
27
1.89

Tables:   1

The End!