Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004679.1 Hibiscus syriacus cultivar Beakdansim tig00010492_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63626

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1603--1661
29
2.0
29
93
0
100
50
15
11
22
1.76
10753--10792
2
20.0
2
100
0
80
50
0
0
50
1.00
11137--11197
2
30.5
2
100
0
122
50
0
0
49
1.00
17377--17572
89
2.2
90
82
6
236
26
25
25
22
2.00
20209--20249
18
2.2
19
86
4
57
7
34
36
21
1.82
24800--24840
21
2.0
21
95
0
73
21
17
21
39
1.93
31890--32114
29
7.8
29
82
6
181
31
6
9
52
1.59
31918--32114
58
3.4
57
82
8
220
32
6
9
51
1.61
31890--32141
87
2.9
87
81
6
246
32
6
9
51
1.60
32005--32149
29
5.1
27
87
2
146
33
10
8
47
1.69
33494--33534
10
3.5
13
78
21
54
60
0
7
31
1.24
33466--33534
25
2.8
25
80
8
72
57
4
4
33
1.38
34811--34875
27
2.4
27
97
2
121
32
16
18
32
1.94
37721--37763
23
1.9
22
85
4
59
58
2
0
39
1.11
37865--37940
21
3.7
21
78
5
75
42
31
0
26
1.56
37865--37944
14
5.9
14
72
11
58
42
31
0
26
1.56
37868--37950
20
4.1
19
78
7
67
43
31
0
25
1.55
38082--38149
2
34.5
2
97
2
129
50
0
0
50
1.00
38497--38542
13
3.5
13
80
14
58
56
0
2
41
1.11
38676--38733
2
29.0
2
100
0
116
50
0
0
50
1.00
40211--40250
22
1.9
21
90
10
64
12
22
42
22
1.87
41300--41345
18
2.5
18
86
10
58
2
30
21
45
1.64
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41311--41360
18
2.7
19
84
6
50
4
26
22
48
1.68
42910--42991
22
3.8
21
77
7
83
17
25
31
25
1.97
42910--42991
23
3.7
22
83
4
103
17
25
31
25
1.97
49446--49520
25
3.1
23
81
11
78
74
2
9
13
1.16
49641--49676
2
18.0
2
100
0
72
50
0
0
50
1.00
49770--49818
24
2.0
24
84
4
62
63
0
2
34
1.06
49771--49825
26
2.1
26
86
0
74
65
0
3
30
1.10
50974--51008
12
2.9
12
84
16
54
51
0
0
48
1.00
51827--51946
43
2.8
43
79
0
123
25
15
26
32
1.96
52890--52932
6
7.0
6
85
15
61
0
18
0
81
0.69
62052--62083
13
2.6
12
90
9
55
75
0
15
9
1.05
62077--62111
13
2.7
13
81
0
52
71
0
0
28
0.86

Tables:   1

The End!