Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004683.1 Hibiscus syriacus cultivar Beakdansim tig00010497_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72753

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6835--6884
26
2.0
26
88
4
75
42
0
2
56
1.11
7791--7847
12
4.5
12
72
10
51
54
0
0
45
0.99
12931--12963
17
1.9
17
88
11
50
57
9
6
27
1.53
14703--14736
2
17.5
2
93
6
61
0
52
0
47
1.00
15314--15352
20
2.0
20
85
14
55
46
0
0
53
1.00
17528--17557
15
2.0
15
100
0
60
73
0
0
26
0.84
17528--17568
12
3.3
13
76
13
50
73
0
0
26
0.84
17601--17644
23
2.0
22
82
13
54
68
0
11
20
1.20
19370--20394
165
6.2
164
92
1
1550
24
21
24
29
1.99
23764--23808
19
2.4
19
92
3
74
66
8
13
11
1.44
25648--25685
18
2.1
18
85
9
51
73
0
2
23
0.95
25653--25682
15
2.0
15
100
0
60
73
0
0
26
0.84
25653--25693
12
3.3
13
76
13
50
73
0
0
26
0.84
25726--25769
23
2.0
22
82
13
54
68
0
11
20
1.20
26791--26838
24
2.0
24
91
0
78
45
0
0
54
0.99
31739--31783
23
2.0
23
86
0
63
35
11
20
33
1.88
38028--38057
2
15.0
2
100
0
60
50
0
0
50
1.00
40132--40170
20
1.9
21
89
5
62
46
7
30
15
1.74
44782--44820
2
19.5
2
94
0
69
46
0
2
51
1.14
46137--46169
16
2.1
16
100
0
66
57
24
12
6
1.57
46225--46279
16
3.4
16
94
0
101
56
23
12
7
1.61
47009--47078
24
2.9
24
87
4
88
60
18
8
12
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47034--47085
14
4.0
14
78
19
58
53
25
11
9
1.67
59088--59147
23
2.5
24
91
2
104
41
0
11
46
1.40
63043--63100
17
3.5
17
71
20
50
43
5
27
24
1.75
72451--72521
27
2.6
28
74
14
76
28
18
4
49
1.66

Tables:   1

The End!