Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004688.1 Hibiscus syriacus cultivar Beakdansim tig00010521_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54266

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
629--661
17
1.9
17
88
11
50
27
6
9
57
1.53
4280--4310
2
15.5
2
100
0
62
48
0
51
0
1.00
4394--4575
90
2.0
91
98
1
357
41
9
26
21
1.85
13327--13353
12
2.2
12
100
0
54
22
0
0
77
0.76
19583--19617
7
5.1
7
96
3
63
0
14
42
42
1.45
21086--21148
28
2.2
28
100
0
126
34
33
9
22
1.86
25805--25842
19
2.0
19
94
0
67
28
26
26
18
1.98
26192--26216
12
2.1
12
100
0
50
36
8
0
56
1.29
31327--31377
22
2.2
23
86
6
68
43
5
0
50
1.26
31665--31726
31
2.0
32
90
3
99
29
9
6
54
1.57
31891--31978
25
3.4
27
77
17
98
53
0
3
43
1.17
31910--31992
25
3.5
23
79
14
64
53
0
4
42
1.22
46201--46242
2
21.0
2
95
0
75
47
0
2
50
1.14
47824--47869
14
2.9
16
75
18
51
52
2
6
39
1.40

Tables:   1

The End!