Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004689.1 Hibiscus syriacus cultivar Beakdansim tig00010523_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61392

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19102--19219
11
10.7
11
71
13
66
77
0
9
12
0.98
19099--19200
18
5.4
18
69
17
73
79
0
7
12
0.93
19096--19179
28
3.1
26
75
14
73
78
0
8
13
0.96
20406--20436
15
2.1
15
100
0
62
48
6
12
32
1.67
20452--20751
134
2.2
132
83
2
386
32
22
16
28
1.95
22807--22848
17
2.3
18
88
12
59
28
4
0
66
1.12
32667--32800
45
3.0
45
93
2
218
38
6
21
32
1.80
38447--38491
14
3.2
14
96
0
81
44
6
4
44
1.50
42202--42378
29
6.1
29
91
0
246
24
22
9
44
1.81
42347--42501
81
1.9
81
84
5
206
29
23
12
34
1.92
42453--43116
68
9.8
68
90
0
943
32
24
14
28
1.94
43292--43443
55
2.8
55
80
10
170
36
19
9
34
1.83
48608--48653
2
23.0
2
100
0
92
50
0
0
50
1.00
48791--49025
29
8.1
29
96
0
371
26
22
5
44
1.76
48994--49148
81
1.9
81
82
2
195
31
19
12
36
1.89
49100--49431
68
4.9
68
85
1
423
33
22
14
29
1.93
49100--49431
136
2.4
136
87
1
468
33
22
14
29
1.93
52389--52451
21
3.0
21
65
9
56
36
14
4
44
1.66
53490--53580
30
3.0
30
98
0
173
36
15
16
31
1.90
58848--58894
23
2.0
23
84
8
60
34
17
14
34
1.90

Tables:   1

The End!